Copyright (C) 2011, ATR All Rights Reserved. License : New BSD License(see VBMEG_LICENSE.txt)
0001 % 0002 % Copyright (C) 2011, ATR All Rights Reserved. 0003 % License : New BSD License(see VBMEG_LICENSE.txt) 0004 0005 % Set parameter 0006 p = dmri_set_parm_tutorial; 0007 0008 % processing time(only as a guide) 0009 % undescribed process will end 0010 % within a minute. 0011 dmri_process_T1_dicom_convert(p); 0012 dmri_process_T1_bias_correct(p); 0013 % Do SPM8 segment operation here.% 0014 0015 dmri_process_T1_brain_extract(p); 0016 dmri_process_DWI_import(p); 0017 dmri_process_DWI_motion_correct(p); % 30 minutes 0018 dmri_process_DWI_brain_mask_extract(p); 0019 dmri_process_T1_freesurfer(p); % 12-24 hours 0020 dmri_process_FA_image_coreg_create(p); 0021 dmri_process_images_coregister(p); % 1 hour 0022 dmri_process_FA_image_clean(p); 0023 dmri_process_cortex_import(p); % 3 minutes 0024 dmri_process_cortex_parcel(p); % 30 minutes 0025 dmri_process_FA_parcel_volume_files_create(p); % 35 minutes 0026 dmri_process_fiber_tracking_mask_create(p); 0027 dmri_process_fodf_calc(p); 0028 dmri_process_fiber_tracking_execute(p); % 3 hours 0029 dmri_process_connection_calc(p); 0030