Test job_inflate.m, a sample program of VBMEG [syntax] Vinfl = test_job_inflate(proj_root,test_parm) [input] proj_root: <<string>> VBMEG project root directory. test_parm: <<struct>> Test condition variables. --- fields of test_parm cortex: <<string>> 'bv' for BrainVoyager, 'fs' for FreeSurfer. --- [output] Vinfl: <<matrix>> Vertex coordinates of inflated model. VBMEG cortical surface model file (.brain.mat) is updated with variables of inflated model. [history] 2010-06-30 Taku Yoshioka Copyright (C) 2011, ATR All Rights Reserved. License : New BSD License(see VBMEG_LICENSE.txt)
0001 function Vinfl = test_job_inflate(proj_root,test_parm) 0002 % Test job_inflate.m, a sample program of VBMEG 0003 % 0004 % [syntax] 0005 % Vinfl = test_job_inflate(proj_root,test_parm) 0006 % 0007 % [input] 0008 % proj_root: <<string>> VBMEG project root directory. 0009 % test_parm: <<struct>> Test condition variables. 0010 % --- fields of test_parm 0011 % cortex: <<string>> 'bv' for BrainVoyager, 'fs' for FreeSurfer. 0012 % --- 0013 % 0014 % [output] 0015 % Vinfl: <<matrix>> Vertex coordinates of inflated model. 0016 % VBMEG cortical surface model file (.brain.mat) is updated with 0017 % variables of inflated model. 0018 % 0019 % [history] 0020 % 2010-06-30 Taku Yoshioka 0021 % 0022 % Copyright (C) 2011, ATR All Rights Reserved. 0023 % License : New BSD License(see VBMEG_LICENSE.txt) 0024 0025 vb_disp('--- Start: test_job_inflate'); 0026 resultdir = './vbmeg_result/'; 0027 0028 % 0029 % Standard parameters 0030 % 0031 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% 0032 switch test_parm.cortex, 0033 case 'bv', 0034 dirname = 'vbmeg_testdata/BV2000/'; 0035 brain_parm.BV_left_infl_file = [dirname 'lh_recosm_infl500.srf']; 0036 brain_parm.BV_right_infl_file = [dirname 'rh_recosm_infl500.srf']; 0037 brain_parm.brain_file = [resultdir 'sbj_test_bv.brain.mat']; 0038 brain_parm.area_file = [resultdir 'sbj_test_bv.area.mat']; 0039 0040 case 'fs', 0041 dirname = 'vbmeg_testdata/FS4.2/'; 0042 brain_parm.FS_left_infl_file = [dirname 'lh.inflated.asc']; 0043 brain_parm.FS_right_infl_file = [dirname 'rh.inflated.asc']; 0044 brain_parm.FS_left_curv_file = [dirname 'lh.curv.asc']; 0045 brain_parm.FS_right_curv_file = [dirname 'rh.curv.asc']; 0046 brain_parm.brain_file = [resultdir 'sbj_test_fs.brain.mat']; 0047 brain_parm.area_file = [resultdir 'sbj_test_fs.area.mat']; 0048 end; 0049 0050 % 0051 % Execute vb_job_inflate 0052 % 0053 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% 0054 vb_job_inflate(proj_root,brain_parm); 0055 Vinfl = vb_load_cortex(brain_parm.brain_file,'Inflate'); 0056 vb_disp('--- End : test_job_inflate');