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vb_set_current_parm

PURPOSE ^

Parameter setting of "current_parm" --- sample file

SYNOPSIS ^

function [current_parm] = vb_set_current_parm()

DESCRIPTION ^

 Parameter setting of "current_parm" --- sample file
  [current_parm] = vb_set_current_parm;
  
 2006/09/20 ver 0.5 by M. Sato

 Copyright (C) 2011, ATR All Rights Reserved.
 License : New BSD License(see VBMEG_LICENSE.txt)

CROSS-REFERENCE INFORMATION ^

This function calls: This function is called by:

SOURCE CODE ^

0001 function [current_parm] = vb_set_current_parm()
0002 % Parameter setting of "current_parm" --- sample file
0003 %  [current_parm] = vb_set_current_parm;
0004 %
0005 % 2006/09/20 ver 0.5 by M. Sato
0006 %
0007 % Copyright (C) 2011, ATR All Rights Reserved.
0008 % License : New BSD License(see VBMEG_LICENSE.txt)
0009 
0010 %
0011 % --- Standard parameters
0012 %
0013 
0014 % Input file  : Result of VBMEG estimation
0015 %               (relative path from proj_root)
0016 current_parm.bayesfile = []; % .bayes.mat
0017 
0018 % Output file : Estimated current file
0019 %               (relative path from proj_root)
0020 current_parm.currfile = []; % .curr.mat
0021 
0022 % Flag for current average
0023 current_parm.trial_average = ON;
0024 % ON : Average current over all sessions.
0025 % OFF: Current for each session.
0026 
0027 % Time points where currents are calculated.
0028 % For example,
0029 % tsubsmpl = [200:300], means currents are calculated from t=200 to t=300
0030 % tsubsmpl = [1:5:100], means currents are calculated at every 5 sample
0031 % tsubsmpl = [] --> whole time period is calculated
0032 current_parm.tsubsmpl = [];
0033 
0034 % If current for each session is calculated (trial_average = OFF)
0035 % and data size exceed memory size, use 'vb_job_current_tr'
0036 % In this case, specify output directory to save current file for each trial
0037 current_parm.jactdir = []; % (relative path from currfile)
0038 
0039 %
0040 % --- Advanced parameters
0041 %  Do not change, unless you understand the meaning of the parameters!!
0042 %
0043 
0044 % If current of specified area is needed, specify area_key
0045 current_parm.areafile = []; % .area.mat
0046 current_parm.area_key = [];
0047 
0048 % Flag for how to calculate representative time course from the set of
0049 %   time courses estimated on the vertices in the specified area.
0050 % 0 : Current time courses for all vertices are
0051 %       saved. N=size(J,1) is the number of vertices.
0052 % 1 : Average of time courses (N=1).
0053 % 2 : SVD is applied and the first principal component is extracted (N=1).
0054 current_parm.flag = 0;
0055 
0056 % overlap_mode
0057 %   = 0 : current is averaged over overlapped time window
0058 %   = 1 : current is not averaged for overlapped window
0059 %         current time series of each time windows
0060 %         are concatenated sequentially for spectral analysis
0061 current_parm.overlap_mode = 0;

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